Showing posts with label medicine. Show all posts
Showing posts with label medicine. Show all posts

Friday, October 30, 2009

Med students hoist P2P Jolly Roger to get access to papers - Ars Technica

Med students hoist P2P Jolly Roger to get access to papers - Ars Technica 

Med students hoist P2P Jolly Roger to get access to papers A study provides evidence that file sharing takes place with some very specialized media: the research papers published in scientific journals. By John Timmer | Last updated October 29, 2009 6:15 AM CT

The ease with which information can be spread through the Internet has exacerbated tensions among those who pay for, conduct, and publish scientific research. Many journals still require subscription or per-article payments for access to the research they publish, which often leaves the public, who funds a significant percentage of the research, on the wrong side of a pay wall. So far, however, there's been little evidence that the public has been interested enough in research to engage in the sort of widespread file-sharing that plague other content industries. But a new study suggests that may just be because nobody's looked very carefully.

The study, which was spotted by TechDirt, appears in an open-access journal, so anyone can read its entire contents. It describes the sharing of over 5,000 research papers on a site frequented by medical professionals, and the formal community rules that governed the exchange.

During the six months in 2008 that the author tracked the activity on the site, which was a discussion board focused on medical fields, it had over 125,000 registered users. Anyone could start an account, but many of the fora were focused on specific issues, such as those faced by nurses and residents. In addition to those, however, there was a section called the Electronic Library that contained a forum called "Databases & Journals—Requests and Enquiries."

Up to three times a day, users were allowed to submit a request for a published research article, accompanied by a link to the free abstract hosted at the journal's website. Other users would then download the full article and host it somewhere, providing a link in the discussion. If everything was set up properly, the site would track the number of downloads.

Over the course of six months, over 6,500 articles were requested, and over 80 percent of those requests were successfully filled. The articles received a mean of 4.47 views, with one attracting 177 downloads. The author found that the requests roughly paralleled the journal's impact factors, with Nature and Science coming out on top, followed by more specialized medical journals. Figuring an average cost of $30 a download (the price requested by many journals), the publishing industry was potentially losing $1.4 million a year due to the site, although it's unlikely that many of the downloaders would have actually exercised their option to buy an article.

According to the author, the site (which is never named) went inactive in early 2009, although its contents were indexed via Google prior to that point.

The author considers this behavior in the context of the Open Access debate, which has played out in Congress and research institutions. He also terms the file sharing behavior among people involved in the medical profession "ethically dubious," given it involves the distribution of copyrighted material.

There is, however, an alternate way of viewing this that the author doesn't discuss: at least some medical professionals are apparently unable to obtain the publications they feel are needed for their training or practice; given their job responsibilities, it seems unethical to withhold these materials.

In addition, it's worth noting that, although this sort of informal sharing would be obviated if all research was open access, it has a very different history from the formal open access movement. For many years, it was traditional for anyone publishing a paper to order a stack of what were termed "reprints"—essentially the journal article without the rest of the journal's contents—from the publisher, in order to share with colleagues or anyone who was interested, but did not have access to the journal. With the advent of digital publishing, this sort of service shifted to the emailing of PDFs—in a lot of ways, the file sharing seen here could be viewed as the next logical step in this publication sharing process.

In any case, the amount of sharing that goes on is undoubtedly much larger than the file exchanges observed in the study. Many authors are now choosing to simply place articles where anyone can find them, either ahead of print at places like the arXiv, or after, on their university's servers. Offers to share paywalled articles also occur in public forums that aren't dedicated to this exchange, at least based on some of the comments attached to Ars' science articles.

Many publishers are readily adapting to and, in some cases, embracing the increased demands for public access to research results. But there remain a number who are resisting the trend. The study suggests that publishers might do well to adopt some sort of formalized access system, or they may end up facing a growth in the sites that encourage the same sort of sharing that has caused the movie and film industries so much indigestion.

The Internet Journal of Medical Informatics, 2009. DOI unavailable.

Med students hoist P2P Jolly Roger to get access to papers - Ars Technica

Friday, June 12, 2009

Open-Access Publisher Appears to Have Accepted Fake Paper From Bogus Center - Chronicle.com

Open-Access Publisher Appears to Have Accepted Fake Paper From Bogus Center - Chronicle.com 

Open-Access Publisher Appears to Have Accepted Fake Paper From Bogus Center

The medical-research industry is under growing pressure to improve its ethical standards. Similar pressure has extended to peer-reviewed medical journals, after Elsevier, a publishing leader, admitted to publishing at least nine fake journals from 2000 to 2005.

In other words, it’s an especially bad time for a medical journal to be duped by an author who, say, submits a fake computer-generated research paper from a fake institution he named the Center for Research in Applied Phrenology — or CRAP.

And yet that’s exactly what appears to have happened.

The deception was the work of Philip M. Davis, a doctoral student in communication at Cornell University who serves as executive editor of the Society for Scholarly Publishing’s Scholarly Kitchen blog.

Mr. Davis said he had concocted the plan after receiving numerous “aggressive” unsolicited e-mail messages from Bentham Publishing, which finances its line of 200 open-access scientific journals by charging authors a publication fee.

Mr. Davis and the blog’s editor in chief, Kent R. Anderson, submitted two research papers that were created by a computer program at MIT called SCIgen that describes itself as generating random text intended to “maximize amusement, rather than coherence.”

One of the papers was rejected by Bentham, and the other — a nonsensical five-page report with footnotes and graphical charts that purported to describe an Internet process called the “Trifling Thamyn” — was accepted after the publisher said it had been peer-reviewed. Mr. Davis reported that an invoice for $800 had been issued by Bentham, without any evidence that the article was actually peer-reviewed.

The publications director at Bentham, Mahmood Alam, told The Chronicle by e-mail that, “to the best of our knowledge, we have not published any article from the Center for Research in Applied Phrenology in any of our journals.” Mr. Davis said he had written to Bentham to withdraw the paper after its publication was approved.

Bentham’s subscription manager, Pradeep Menon, reached by telephone at the company’s headquarters in the United Arab Emirates, said he was aware of the accusation but had no further details and could not offer any other company official to comment.

“It’s the first of its kind because we never had such an insinuation charged against us,” Mr. Menon said. “All of our journals are peer-reviewed — that is 100 percent sure.”

Similar scammers have had success in the past, most notably the hoax published in the journal Social Text in 1996 by Alan D. Sokal, a physicist at New York University.

The “popular conception” that open-access publishers rely on publication fees, meanwhile, may not even be true, according to Stuart M. Shieber, a professor of computer science at Harvard University. Mr. Shieber, in his blog, The Occasional Pamphlet, said he had devised a program to pull data out of computerized medical-journal listings and concluded that only about 23 percent of open-access journals charge publication fees. —Paul Basken

Open-Access Publisher Appears to Have Accepted Fake Paper From Bogus Center - Chronicle.com

Wednesday, January 14, 2009

Cell Transplantation Now Open-Access

 Cell Transplantation Now Open-Access

Cell Transplantation Now Open-Access

Cell Transplantation - The Regenerative Medicine Journal , the number two journal ranked by impact factor in the field of transplantation, has become an "open access" journal from the 1st January 2009, starting with volume 18, making it available on the World Wide Web without subscription to researchers and clinicians as well the public and members of the media. The journal's new open access policy aligns it with the policies of a growing number of funding agencies, including the National Institutes of Health and the Wellcome Foundation, said journal coeditor-in-chief Dr. Paul Sanberg, Distinguished Professor at University of South Florida Health.
"Making important research easily accessible to the public creates a win-win situation for citizens and for researchers," said Sanberg. "The advantage for our authors is that fellow researchers and students will be able to download, reference and cite the latest research. Also, members of the public, who may have interests or concerns about the progress of the science of cell transplantation, can be better informed about groundbreaking research."
The open access movement in scholarly publishing, increasing over the last several years, unlocks an educational door that formerly required an expensive key. Many researchers, as well as institutional libraries, have in the past been unable to afford to provide their students, researchers and faculty members expensive journals with subscription rates that rise into the hundreds of dollars per year. It is estimated that globally well over 1,500 scholarly journals are now open access journals.
According to Cell Transplantation co-editor-in-chief Dr. Camillo Ricordi, Diabetes Research Institute, University of Miami Miller School of Medicine, accessibility also means greater impact on the science community when more researchers are able to access, read and cite a greater number of studies.
"Science can move more quickly when access to the latest research is unhindered," said Dr. Ricordi.
Contributors to Cell Transplantation have applauded the move.
Both Drs. Ricordi and Sanberg agree that the public, who will ultimately benefit from the advancements in cell transplantation, should be able to stay informed.
"Cell Transplantation represents hope for millions of people who want to see our pioneering clinical efforts treat and cure diseases such as cancer, diabetes, spinal cord injury, Alzheimer's disease and Parkinson's disease," said Dr. Sanberg.
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Article adapted by Medical News Today from original press release.
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Cell Transplantation Now Open-Access

BioMed Central Blog : Head & Neck Oncology: a new open access publication

BioMed Central Blog : Head & Neck Oncology: a new open access publication 

Head & Neck Oncology: a new open access publication

BioMed Central has launched a new open access publication, Head & Neck Oncology. Led by Editors-in-Chief Adel El-Naggar, Colin Hopper, Waseem Jerjes and Tahwinder Upile, the journal encompasses all aspects of clinical practice, basic and translational research relating to tumours of the head and neck. The journal is the official publication of the Head & Neck Optical Diagnostics Society.
By providing researchers and clinicians in the field with practical updates at the edge of translational research, the journal aims to facilitate collaboration between specialists for the benefit of the patients. For further information please visit the journal ‘About’ page, or read the inaugural Editorial.
Head & Neck Oncology is providing financial assistance to support the journal's important contribution to the field. Authors who would like to request assistance with article-processing charges are encouraged to contact the Editors-in-Chief.
Register now to receive article alerts when new research is published, or visit the instructions for authors before submitting your own research to Head & Neck Oncology.

BioMed Central Blog : Head & Neck Oncology: a new open access publication